PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g89980
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 263aa    MW: 29779 Da    PI: 10.2795
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g89980genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.78.9e-11189229650
         AP2   6 VrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaar 50 
                 Vr +k +g+++ eIrd +     + kr++lg+f taeeA + +   +
  CA00g89980 189 VRKRK-SGKFATEIRDpF-----SkKRIWLGTFNTAEEASEVYQSKK 229
                 89888.7*********66.....44**************99886655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.025180243IPR001471AP2/ERF domain
SMARTSM003803.4E-7189239IPR001471AP2/ERF domain
SuperFamilySSF541713.73E-10189233IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.4E-15189234IPR001471AP2/ERF domain
CDDcd000184.15E-15189225No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MKSPAKQDFI EGNQEEDFIQ RKIRVKILDP DATESSSDDD EQQEKRPKYI FHEIIQEKVK  60
IQSFSINNGS PFDFYQFSGK LSPMVRKRKC GKLGTEEKLK VAIFAKSENG SSGDLPLMAD  120
SQTSDSLKNI TTEYEEKLKV AKNAKVKRAI SAKSEIGSSS SEVKIQSLSL INRKSLSFDQ  180
VSGKLPPMVR KRKSGKFATE IRDPFSKKRI WLGTFNTAEE ASEVYQSKKL EFQEKLNKAK  240
NANKKRLFLQ NVNLGCHLVI HH*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754446e-78HG975444.1 Solanum pennellii chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016548599.11e-131PREDICTED: dentin sialophosphoprotein-like
TrEMBLA0A2G2XUM20.0A0A2G2XUM2_CAPAN; Uncharacterized protein
STRINGSolyc05g009250.1.15e-72(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1553156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.22e-14ERF family protein