PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA00g91430

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ZF-HD

Protein Properties

Length: 137aa MW: 15341.6 Da PI: 8.3872

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA00g91430	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	52	1.7e-16	14	65	3	55
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRr 55 ++Y Clk hA + G avD C+Ef++s g++gt++a Ca CgC FHR CA00g91430 14 VIKYGVCLKSHATKFGHFAVDRCCEFVKS-GDDGTKEAYICANCGCIWGFHRI 65 689***********************9.999*****************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD125774	1.0E-9	15	64	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Pfam	PF04770	1.2E-16	15	65	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profile	PS51523	16.576	17	66	IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain

Sequence ? help Back to Top
Protein Sequence Length: 137 aa Download sequence Send to blast
MTSNSSSNSI DKMVIKYGVC LKSHATKFGH FAVDRCCEFV KSGDDGTKEA YICANCGCIW 60 GFHRINNPLL LRYQTIKFHF LRNDVIPQGE NVSISHPFMR EIFSTRTPLV SFSTSLPGLI 120 RDPVHENALR DLTTPM*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G2XU67	4e-98	A0A2G2XU67_CAPAN; Mini zinc finger protein 2
STRING	Solyc01g103810.1.1	1e-31	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA13748	6	15

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24660.1	2e-14	homeobox protein 22