PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g05680
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 221aa    MW: 25185.4 Da    PI: 5.8649
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g05680genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-1854104256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa+a++ a+ +++g+
  CA01g05680  54 LYHGVRKRS-WGKWVSEIREPRK---KSRIWLGTFATPEMAARAHDVAAIAIKGH 104
                 69****888.**********843...6**********************999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.4E-1353104IPR001471AP2/ERF domain
CDDcd000181.27E-3153113No hitNo description
Gene3DG3DSA:3.30.730.101.4E-3054112IPR001471AP2/ERF domain
SMARTSM003808.1E-3554117IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-2154112IPR016177DNA-binding domain
PROSITE profilePS5103222.11554111IPR001471AP2/ERF domain
PRINTSPR003671.2E-95566IPR001471AP2/ERF domain
PRINTSPR003671.2E-97793IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MEQEHQSPIS LNNLNNNKTT SSSALTKRPI TLISSKEETN HKKSKKLDDT KHPLYHGVRK  60
RSWGKWVSEI REPRKKSRIW LGTFATPEMA ARAHDVAAIA IKGHLAMLNF PELAHQFPKP  120
ASKCAKDIQS AAAKAAALDI SPRNCMEQES KGELMEVVPC SPDEERETNE DPFLDLPDLL  180
MDLTQEFDEF CYSNYFEFWP EEDLYLWDYS HGTVLEVPRP *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-17501111072Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754471e-102HG975447.1 Solanum pennellii chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016553404.11e-165PREDICTED: ethylene-responsive transcription factor ERF039
TrEMBLA0A2G3AF141e-164A0A2G3AF14_CAPAN; Ethylene-responsive transcription factor
STRINGPGSC0003DMT4000123149e-97(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.19e-35ERF family protein