PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g05690
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 95aa    MW: 10894.3 Da    PI: 10.9069
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g05690genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP22.82.9e-075577224
         TCP  2 agkkdrhskihTkvggRdRRvRl 24
                a kkdrh ki T+ ++R RR+Rl
  CA01g05690 55 ASKKDRHNKINTAHDPRHRRMRL 77
                78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036342.2E-65678IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    Send to blast
MVEEDSKKLD KQEEEDHEEL VLKSSKNKKD EMSSTTTSTM RRKNNKCATG AGVGASKKDR  60
HNKINTAHDP RHRRMRLTRN SSQILQFARL SRVR*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016567552.12e-32PREDICTED: transcription factor CYCLOIDEA-like
TrEMBLA0A2G3AEW92e-61A0A2G3AEW9_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000145729e-16(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA24822256