PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g09930
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 161aa    MW: 18255.2 Da    PI: 4.1754
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g09930genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.91.7e-101784269
    trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69
                Wt +e l+L++  r+++ + +++ +  ++W++  + + ++g++rs +qCk++we++  +y k+k +e 
  CA01g09930 17 WTLHESLTLVNEMRSTQIECGNTLASFQKWQSTVQSCNSQGVNRSLNQCKKRWESMLEQYNKVKPWEM 84
                ****************************************************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.9E-91683No hitNo description
PROSITE profilePS500906.5971773IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MEKTSGLRTR SQAAPDWTLH ESLTLVNEMR STQIECGNTL ASFQKWQSTV QSCNSQGVNR  60
SLNQCKKRWE SMLEQYNKVK PWEMAYWSDF DEERKRELEL PEEFDCELFK GIESYLSCLE  120
GEDGAGADTD PDTDPEAQQV PGNNAFFEIG TASLFNIFGC *
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574293.11e-109PREDICTED: trihelix transcription factor ASR3
TrEMBLA0A1U8GZR11e-107A0A1U8GZR1_CAPAN; trihelix transcription factor ASR3
TrEMBLA0A2G2XM581e-107A0A2G2XM58_CAPBA; Uncharacterized protein
TrEMBLA0A2G3AGL91e-107A0A2G3AGL9_CAPAN; Uncharacterized protein
TrEMBLA0A2G3DDP11e-107A0A2G3DDP1_CAPCH; Uncharacterized protein
STRINGSolyc08g069160.2.16e-86(Solanum lycopersicum)
STRINGPGSC0003DMT4000759816e-86(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA83602124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.12e-26sequence-specific DNA binding transcription factors