PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g10630
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family EIL
Protein Properties Length: 240aa    MW: 26780 Da    PI: 8.9591
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g10630genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3275.32.5e-84602301176
                 XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekv 99 
                 eel++rmwkd ++lkrlke++k   ++++a +++k++++ ++qarrkkmsraQDgiLkYMlk mevcna+GfvYgiipekgkpv+g+sd++raWWkekv
  CA01g10630  60 EELERRMWKDHIKLKRLKEKQKL--AARQA-AKKKENKQVTDQARRKKMSRAQDGILKYMLKLMEVCNARGFVYGIIPEKGKPVSGSSDNVRAWWKEKV 155
                 8*****************99996..44555.889999************************************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S CS
        EIN3 100 efdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtG 176
                 +fd+ngpaai+ky+a++l+ +++ ++  ++ + ++ l++lqD+tlgSLLs+lmqhcdppqr++ple+gv+pPWWP  
  CA01g10630 156 KFDKNGPAAIAKYEAECLARGEGVGS--QNGNLQSVLQDLQDATLGSLLSSLMQHCDPPQRKYPLERGVSPPWWPXX 230
                 *******************9988888..679999*****************************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.4E-8760234No hitNo description
Gene3DG3DSA:1.10.3180.102.9E-22183229IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.7E-19187229IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MSFLCFANVS LLLSVASLVD RVPVPVLVGG NRNSSDIEVD DIRCDNLDEK DVSDEEIEPE  60
ELERRMWKDH IKLKRLKEKQ KLAARQAAKK KENKQVTDQA RRKKMSRAQD GILKYMLKLM  120
EVCNARGFVY GIIPEKGKPV SGSSDNVRAW WKEKVKFDKN GPAAIAKYEA ECLARGEGVG  180
SQNGNLQSVL QDLQDATLGS LLSSLMQHCD PPQRKYPLER GVSPPWWPXX XATMVANGG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-20187228950ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
188103KKKENKQVTDQARRKK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755130.0HG975513.1 Solanum lycopersicum chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016576629.11e-140PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1
SwissprotO231162e-99EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A2G3AHB51e-172A0A2G3AHB5_CAPAN; ETHYLENE INSENSITIVE 3-like 1 protein
STRINGPGSC0003DMT4000768901e-125(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-89ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]