PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g26660
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 152aa    MW: 17601.4 Da    PI: 9.8128
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g26660genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM661.1e-20141422128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk..kvkaeek..ewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 
                 + G+rFhP deel+ +yL k ++ k+ ++ + i   d+y + +Pw++ +  ++  ++     y F+k +kk++ g r  r ++  g+W+    +k+v++
  CA01g26660  14 ALGMRFHPADEELI-RYLLKFISCKSYSC-DNILLEDLYgNKKPWEIFEsnSLGDKDAknVRYLFTKLKKKKSDGIRFIRtVIGGGFWNGLDCEKSVYD 110
                 67************.9***********99.5566667772569****632333222222245******************8899*************** PP

         NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                  + +lvg kk   +   +  ++    W+m ey+l
  CA01g26660 111 -GPKLVGSKKNYRYQ-YKGYQTADIVWIMREYSL 142
                 .999********996.455555699*******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-219145IPR003441NAC domain
PROSITE profilePS5100522.15313151IPR003441NAC domain
PfamPF023653.4E-1216142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MSEISSNSRK PVMALGMRFH PADEELIRYL LKFISCKSYS CDNILLEDLY GNKKPWEIFE  60
SNSLGDKDAK NVRYLFTKLK KKKSDGIRFI RTVIGGGFWN GLDCEKSVYD GPKLVGSKKN  120
YRYQYKGYQT ADIVWIMREY SLDDKILKAL R*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016576230.12e-88PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A2G3ALR18e-98A0A2G3ALR1_CAPAN; Uncharacterized protein
STRINGXP_009786835.14e-54(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10426625
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.11e-17NAC domain containing protein 2