PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g26770
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 500aa    MW: 56722.2 Da    PI: 5.466
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g26770genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.65.3e-14298345254
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  ++h + Er+RR ++N+++  Lr+++P++      K + a+i++ A++YI++L
  CA01g26770 298 ETKHFATERQRRVHLNDKYKALRSMVPNP-----SKTDRASIVKDAIDYINEL 345
                 689*************************9.....7***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.62E-15292359IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.669296345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.57E-12297347No hitNo description
PfamPF000101.3E-11298345IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.2E-14299357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.0E-11302351IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MTSYVLFFFN RSTKVLQQKT KKMYVEESGC FDADTHHVQN DGVLAEDVFA IQEQHTYHHN  60
PSQQDVAAAA ALEIEFQQQL NLEMEECYNN THNNNMQDQL IHDQQNNNNN NNSNQGLSCD  120
QSNWGEMNFP PYQNQEDSNN INNHNNFQQQ NFPIPMSDAP YLTTPDLLNM FPLPRCSQSS  180
LLPQKSPNLL TSLELIGDID GGASTSNAVY DPSLVLPLNL PPQPPLLREL FHSFPHGYGL  240
RNLRSNNNTS FFNGMEERDQ VNGALYQDNG EGRPFDNGIF EFSAGMNDIA KNRDGIKETK  300
HFATERQRRV HLNDKYKALR SMVPNPSKTD RASIVKDAID YINELKRGVN ELKLMVEKKR  360
CSKDRIKRQK KEDGTSLEGL DAKQMDEVEQ SYNGNSLRSS WLQRRSKNTE VDVRIVDDEV  420
TVKLVQQKRI NCLLFASKVL DELQLDLHHV AGGLIGDYYS FLFNSKISEG STVYASAIAK  480
KLIEVVDIQY AAIAPANSY*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754400.0HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016557603.10.0PREDICTED: transcription factor bHLH91-like
RefseqXP_016557604.10.0PREDICTED: transcription factor bHLH91-like
TrEMBLA0A2G3ALV90.0A0A2G3ALV9_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000044970.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.11e-83bHLH family protein