PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g26780
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 406aa    MW: 46134 Da    PI: 6.2239
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g26780genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-10206251454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 +h + E+ RR +  ++f+ Lr+l+P++      K++ a+i   A+ YI++L
  CA01g26780 206 KHHASEKLRRIHFSDKFQALRTLIPNP-----SKNDRATIIVDAIGYINEL 251
                 7999**********************9.....7***************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.46E-13200268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.76202251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.69E-8205252No hitNo description
Gene3DG3DSA:4.10.280.101.9E-12206273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-8206251IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-6208257IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MYAGESLSFD PTSQQNEVLD EKGLLQNHIP TTCVTNFSMG EELQQKFHSS ENNNMNMQEF  60
GHHDEHTNTV LPCVHPNWEE IGFNPNNNQL LSYPISSSLG HLGGFHQRTE IPSTSTNLFY  120
ELPQLNMPIN LCTQQPSLFK DLFHLSPHGS SYGFDSSGTG SLFSHGHHEE EVTGALYHDG  180
SFHHEFSTGD MINSAAIKKR EGNDMKHHAS EKLRRIHFSD KFQALRTLIP NPSKNDRATI  240
IVDAIGYINE LKMRVNDLRN EIDLKKEMMR MKRQRIVEED GAMIMEADED QVVMNKSIMS  300
NWHHQRKCTK NSSTEVDVRV MEDEVSIKLV QQKEMMIKKR MNCLVFVSKA LDELRLDLQH  360
VAGGLIGDHY SYLFNSKICE GCTVYASAIA NKVIEVLDKE HATIN*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015087359.10.0transcription factor bHLH91-like
TrEMBLA0A2G2XRI90.0A0A2G2XRI9_CAPBA; Uncharacterized protein
STRINGSolyc01g081090.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.16e-52bHLH family protein