PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g33480
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 245aa    MW: 27484.5 Da    PI: 5.0258
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g33480genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1862112256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr++  +++Wv+eIr+pse   +kr++lg++ t+e+Aa+a++  +++l+g+
  CA01g33480  62 IYRGVRRRN-NNKWVCEIREPSE---QKRIWLGTYPTPEMAARAHDVVALALRGN 112
                 69****887.8*********976...5*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.94E-2861121No hitNo description
PfamPF008477.7E-1361111IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.8E-2862121IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-2162121IPR016177DNA-binding domain
PROSITE profilePS5103221.4362119IPR001471AP2/ERF domain
SMARTSM003801.1E-2662125IPR001471AP2/ERF domain
PRINTSPR003673.0E-76374IPR001471AP2/ERF domain
PRINTSPR003673.0E-785101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0010371Biological Processregulation of gibberellin biosynthetic process
GO:0016049Biological Processcell growth
GO:0048510Biological Processregulation of timing of transition from vegetative to reproductive phase
GO:0050826Biological Processresponse to freezing
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    Send to blast
MNNNNNSISY FSDSSMANLE RDHSQETSSS SSEKSGGGLL LAANQPKKRA GRKKFKETRH  60
PIYRGVRRRN NNKWVCEIRE PSEQKRIWLG TYPTPEMAAR AHDVVALALR GNLAILNFED  120
SSWRLPVPVS KDPKELRQAA MIAANAFHQD SDESVGVDYM NQEINSNDVV GGGASGSDNN  180
IQNMDILCCN NWGENNEMLE IEGLSWQEKM SEELLFSPTP RFGSCYSWDD VKSDVEVSLW  240
SYNI*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00137DAPTransfer from AT1G12610Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755203e-70HG975520.1 Solanum lycopersicum chromosome ch08, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016557784.10.0PREDICTED: dehydration-responsive element-binding protein 1F-like
TrEMBLA0A1U8FPV30.0A0A1U8FPV3_CAPAN; Dehydration-responsive element-binding protein 1F
TrEMBLA0A2G3APG90.0A0A2G3APG9_CAPAN; dehydration-responsive element-binding protein 1F-like
STRINGXP_009619193.11e-108(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63030.21e-51ERF family protein