PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA01g33490
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 231aa    MW: 25870 Da    PI: 6.9262
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA01g33490genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.6e-194797256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr++  +++Wv+eIr+pse   +kr++lg++ t+e+Aa+a++  +++l+g+
  CA01g33490 47 IYRGVRRRN-NNKWVCEIREPSE---QKRIWLGTYPTPEMAARAHDVVALALRGN 97
                69****887.8*********976...5*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.23E-2846106No hitNo description
PfamPF008477.0E-134696IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-2147106IPR016177DNA-binding domain
SMARTSM003807.0E-2747110IPR001471AP2/ERF domain
PROSITE profilePS5103221.28547104IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-2847106IPR001471AP2/ERF domain
PRINTSPR003672.7E-74859IPR001471AP2/ERF domain
PRINTSPR003672.7E-77086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MANLERDHSQ KTSSSSSEKS GGGLLLAANR PKKRAGRKKF KETRHPIYRG VRRRNNNKWV  60
CEIREPSEQK RIWLGTYPTP EMAARAHDVV ALALRGNLAT LNFEDSSWRL SVPVSKDPKE  120
LRQAAIKAAN AFHQDSYKSV GIDYMNQEVN SDDVVGGGAS GGDKYNIQNM DILCCNNWGE  180
NNEMLEIEGL SWQEKMAEGL LFSPTPRLGS CFSWDDVESD VEVSLWSYDI *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00002PBMTransfer from 475045Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016557785.11e-172PREDICTED: dehydration-responsive element-binding protein 1E-like
TrEMBLA0A1U8FGE91e-171A0A1U8FGE9_CAPAN; Dehydration-responsive element-binding protein 1E
TrEMBLA0A2G3APH11e-171A0A2G3APH1_CAPAN; dehydration-responsive element-binding protein 1E-like
STRINGSolyc08g007820.1.11e-108(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26324183
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.14e-53C-repeat-binding factor 4