PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g00850
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 195aa    MW: 23077.4 Da    PI: 9.6562
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g00850genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.76.3e-181083272
    trihelix  2 WtkqevlaLiearremeerlrr...gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72
                Wt qe+++L+ea++ +eer  r   gk  + +W++v +++++ g+ rs++qC++kw+nl +++kk++e e++  
  CA02g00850 10 WTIQETMVLVEAKKMDEERRMRrqeGKPTELRWKWVEDYCWRNGCLRSQNQCNDKWDNLMRDFKKVREYERRVV 83
                *************977776654233678899**************************************99873 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.131269IPR017877Myb-like domain
PfamPF138373.7E-12980No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MFRDYRKGNW TIQETMVLVE AKKMDEERRM RRQEGKPTEL RWKWVEDYCW RNGCLRSQNQ  60
CNDKWDNLMR DFKKVREYER RVVEAGGEEV VKSYWNIEKN ERKEKNLPTN MLPQIYEALV  120
EVVDKKSQRM LLPSLPPTLQ QQSTQPQITS LPFPPLPTTT TVAPTDYTTH VPFPTVGTLY  180
SPNFSKKKHY LTSS*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755140.0HG975514.1 Solanum lycopersicum chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016561977.11e-119PREDICTED: trihelix transcription factor ASR3
TrEMBLA0A1U8FS101e-117A0A1U8FS10_CAPAN; Uncharacterized protein
TrEMBLA0A2G2Y2931e-117A0A2G2Y293_CAPAN; trihelix transcription factor ASR3
TrEMBLA0A2G3D4541e-117A0A2G3D454_CAPCH; Uncharacterized protein
STRINGSolyc02g069390.1.11e-100(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA48212236
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.18e-50Trihelix family protein