PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g03800
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GeBP
Protein Properties Length: 236aa    MW: 27253.8 Da    PI: 9.7475
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g03800genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573811.7e-2550138397
      DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
                 fqr wsee ei++LqG +++   ++++ps++  af  fvk+ ++ + +k+ql  K+ rLK+K+k++  k       +fsk+hd+k f+ls+kiWg
  CA02g03800  50 FQRAWSEEEEIAILQGYLNYSFLKNSEPSSNYGAFLTFVKDDLQTETNKTQLQHKLTRLKRKYKRNIGK------RKFSKSHDEKLFKLSEKIWG 138
                 9********************************************************************......89*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045049.4E-2450138IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
MAARNIFKSL KAKRPHGDSD KEWTPSPEDS QTYSPEEVIM ESSNVNKSGF QRAWSEEEEI  60
AILQGYLNYS FLKNSEPSSN YGAFLTFVKD DLQTETNKTQ LQHKLTRLKR KYKRNIGKRK  120
FSKSHDEKLF KLSEKIWGEV DKVRNKVDKT SGKMIVDASR SEMSWDFVLN GGTSADLEDW  180
FRRNPRQLIS EKERNEMLEK SQSVKVAKAR QYLLEIQVME EQAKMATDAI QAILS*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016561813.11e-171PREDICTED: uncharacterized protein LOC107860847
TrEMBLA0A2G3A4L21e-173A0A2G3A4L2_CAPAN; Uncharacterized protein
STRINGXP_009763764.17e-62(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30421947
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.11e-19DNA-binding storekeeper protein-related transcriptional regulator