PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g05470
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 117aa    MW: 13220.4 Da    PI: 10.089
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g05470genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM43.69.6e-14611311111
         NAM  11 deelvveyLkkkvegkkleleevikevdiykv.ePwdL..pk.kvka.eekewyfFskrdkkyat.gkrknr..atksgyWkatgkdkevlskkgelvg 101
                 d+el++ yL k v g +++  + i+ vd++   +P++L  p+  ++  +++  y F++ +kk++  +k+ +r  +   g Wka  ++k+++++k+ ++g
  CA02g05470   6 DDELLMTYLLKFVCGVPIQS-HQIRIVDLCGNnKPSQLlnPSqFLNItTNTVNYVFTPLKKKKTCySKNIKReiVSGGGPWKALDNSKPIYDRKNLVIG 103
                 89****************99.67*****997648****543243333134466***999998885355556633566888******************* PP

         NAM 102 lkktLvfykg 111
                  kktL f +g
  CA02g05470 104 FKKTLRFDEG 113
                 *******877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.8711116IPR003441NAC domain
SuperFamilySSF1019419.15E-156113IPR003441NAC domain
PfamPF023653.5E-46111IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    Send to blast
MGNNFDDELL MTYLLKFVCG VPIQSHQIRI VDLCGNNKPS QLLNPSQFLN ITTNTVNYVF  60
TPLKKKKTCY SKNIKREIVS GGGPWKALDN SKPIYDRKNL VIGFKKTLRF DEGTHV*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016541188.17e-44PREDICTED: NAC domain-containing protein 101-like
TrEMBLA0A2G3A4183e-80A0A2G3A418_CAPAN; Uncharacterized protein
STRINGXP_009615661.18e-32(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33811041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.12e-06NAC domain containing protein 41