PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g14270
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 247aa    MW: 27155.9 Da    PI: 8.2761
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g14270genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.69.2e-1359105354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN  +++Lr l+P++      K++Ka+ L ++v  +k+L
  CA02g14270  59 KSHSEAERRRRQRINAHLSTLRNLVPSS-----DKMDKAALLAQVVCQVKQL 105
                 58*************************8.....7************999988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.83756105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.00E-1159107No hitNo description
SuperFamilySSF474591.15E-1259111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.6E-1059105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.5E-1360107IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.1E-1162111IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048733.27E-8145190No hitNo description
SuperFamilySSF550216.87E-5145193No hitNo description
Gene3DG3DSA:3.30.70.2603.8E-6145188No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MNFQISGSSG EFCENEAKGS KGVPQSLVLD IEKSELVKAS GRVEKKVGKS EGKTIAALKS  60
HSEAERRRRQ RINAHLSTLR NLVPSSDKMD KAALLAQVVC QVKQLKETAT HVSESFLIPL  120
DSDEIRVETI AENAAIDGTC LYKASICCEY RPDLLSDLRR VLTTLHVNLV KSEISTLGSR  180
VKNVFVFTNN VIDGGYCANI EAQEVFLSTV RQAFSSVLDK VSAFPEYSAY PNKRQRVSCF  240
DSSTLF*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754411e-132HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016559741.10.0PREDICTED: transcription factor bHLH30-like
RefseqXP_016559742.10.0PREDICTED: transcription factor bHLH30-like
TrEMBLA0A1U8FKG51e-180A0A1U8FKG5_CAPAN; Uncharacterized protein
TrEMBLA0A1U8FKJ21e-180A0A1U8FKJ2_CAPAN; transcription factor bHLH30-like
STRINGPGSC0003DMT4000264491e-139(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA67302230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.13e-37bHLH family protein