PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g15280
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 214aa    MW: 25402.5 Da    PI: 10.6897
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g15280genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.63.6e-14843241
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaee 41
                +y+GVr ++ +gr++AeIrd ++    ++r++lg+f+t+ee
  CA02g15280  8 HYRGVRKRP-WGRYAAEIRDpWK----KTRVWLGTFDTPEE 43
                69*******.**********883....5***********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.4E-18843IPR001471AP2/ERF domain
PfamPF008471.7E-7843IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-12843IPR016177DNA-binding domain
CDDcd000185.17E-14843No hitNo description
SMARTSM003806.6E-9850IPR001471AP2/ERF domain
PROSITE profilePS5103215.158843IPR001471AP2/ERF domain
PRINTSPR003679.0E-9920IPR001471AP2/ERF domain
PRINTSPR003679.0E-93147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MASTREGHYR GVRKRPWGRY AAEIRDPWKK TRVWLGTFDT PEEXXXXXXX XXXXXXXXXX  60
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  180
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXX*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6690801e-44AB669080.1 Nicotiana tabacum NtERF#116 gene for ethylene response factor #116, complete cds.
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.14e-22ERF domain protein 12