PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g15310
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 355aa    MW: 38650.9 Da    PI: 9.9422
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g15310genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2316.3e-10649754
         AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                r+++ + r+ AeI  p e   ++ ++lg+++t++eAa+a+++ +k+l+
  CA02g15310  6 RRYP-QMRYGAEITKPGE---TRGIWLGTYDTEKEAAQAYDRVAKRLK 49
                5667.899****999844...4**********99************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.199158IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-15259IPR001471AP2/ERF domain
SuperFamilySSF541711.83E-12559IPR016177DNA-binding domain
CDDcd000185.12E-16660No hitNo description
SMARTSM003807.6E-13664IPR001471AP2/ERF domain
PfamPF008477.7E-6649IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MGMRRRRYPQ MRYGAEITKP GETRGIWLGT YDTEKEAAQA YDRVAKRLKS PGAVLNFPND  60
DSSGKAEDEL NARSDVSDGG VKNNSNDILQ KNNRDNACDI AFTAEAGNIS SASKAGRSAL  120
RNRKPIQNPH FQAGRSALRI REPSQNPQAA HSKASCSTLR IRETINQNPQ APRPKAGGGV  180
LRIREPINQN PQAPRSKAGG GALRIWEPIN QNPLAQAPGG ALRIIQEKNQ NPQAPHFPAD  240
IASSSKAGSN VLRNPEPNQN RQVADPFPAV NVGDAPSQLT DREKYYVEIM KTAGALFPNP  300
ADYRKAIVDC LRDFDNHVNA NNVDNRESVL QDQPPSTTAE DVDTELRLAP LGSK*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016558359.13e-58PREDICTED: ethylene-responsive transcription factor 1-like
TrEMBLA0A2G3A8F60.0A0A2G3A8F6_CAPAN; Ethylene-responsive transcription factor
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.12e-12ERF family protein