PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g17910
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 247aa    MW: 28720.4 Da    PI: 8.559
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g17910genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.21.4e-18813511128
         NAM  11 deelvveyLkkkvegkkleleevikevdiykv..ePwdLpk.....kvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkgelv 100
                 + +l+  yL+k v g ++e+ + i+++d+y +   Pw+L k     + k++++++ yfF++ +kk+ +g++ nr ++  g Wk    +ke+++k+g+++
  CA02g17910   8 ERDLL-SYLQKFVCGMPIEC-HDIRHIDLYGIkkPPWELFKgllrsEGKTGTDQLnYFFTPLKKKSVKGRNFNRtIAGVGQWKGRDISKEIYDKEGSVI 104
                 45566.9*************.56*****9976447****74456553233333446******************66779******************** PP

         NAM 101 glkktLvfykg...rapkgektdWvmheyrl 128
                 g k+t+ f ++   ++++     W+m+ey+l
  CA02g17910 105 GSKRTFRFDEEssrSDNNQLTVYWIMKEYSL 135
                 ********954221334444678******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.9361162IPR003441NAC domain
PfamPF023653.9E-88135IPR003441NAC domain
SuperFamilySSF1019412.88E-1912162IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MKFQQYNERD LLSYLQKFVC GMPIECHDIR HIDLYGIKKP PWELFKGLLR SEGKTGTDQL  60
NYFFTPLKKK SVKGRNFNRT IAGVGQWKGR DISKEIYDKE GSVIGSKRTF RFDEESSRSD  120
NNQLTVYWIM KEYSLDETIV DKLRQRDEIQ KEDYVVCSIM RKVSSRKSSQ DVPSKAENEV  180
FNHHHRDNVP SSSAETCRPW PYHDAAEIRS LPPLDGPFRS LNEEDLALFE KPDPGYPQAY  240
QNKKLG*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016558405.10.0PREDICTED: NAC domain-containing protein 66-like
TrEMBLA0A1U8FI570.0A0A1U8FI57_CAPAN; NAC domain-containing protein 66-like
STRINGXP_009607153.17e-82(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33811041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79580.31e-13NAC family protein