PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA02g18420

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 104aa MW: 11481 Da PI: 7.0715

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA02g18420	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	82.6	4.3e-26	51	100	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWt +LH++Fv+ave GG ++AtPk +l++m+vkgL +++vkSHLQ CA02g18420 51 PRLRWTDDLHHHFVNAVELAGGVDRATPKMVLQVMDVKGLNVNQVKSHLQ 100 8************************************************* PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.5E-24	47	100	IPR009057	Homeodomain-like
PROSITE profile	PS51294	9.067	47	103	IPR017930	Myb domain
SuperFamily	SSF46689	1.16E-12	49	102	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.7E-20	51	103	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence Send to blast
MNKGLFDMSE NSSENVSCDL SLSLSHAAQQ NVLESSNDNS GVRSYVRSKM PRLRWTDDLH 60 HHFVNAVELA GGVDRATPKM VLQVMDVKGL NVNQVKSHLQ VIF*

Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016560138.1	5e-67	PREDICTED: two-component response regulator ARR10-like
Swissprot	Q700D9	2e-22	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A1U8FUP2	1e-65	A0A1U8FUP2_CAPAN; two-component response regulator ARR10-like
STRING	XP_009623365.1	2e-29	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA7450	20	29

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	4e-26	G2-like family protein