PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g22090
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 323aa    MW: 35820.7 Da    PI: 6.2841
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g22090genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.85.4e-052703081255
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 R +++ ++++ L +l+ +      +K + a++L++A+ YI+ Lq
  CA02g22090 270 RKEKLGDRISALHRLVAPF-----GKTDTASVLTEAIGYIQFLQ 308
                 6778889999999999998.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.47E-6256311No hitNo description
PROSITE profilePS5088811.687258307IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-9268311IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-6268310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MDSTNLHNHR QLQQQQQLSG YPFFAGVSTL HDWNSTMTSE EEYYYKGHMK RSIGTFPLMN  60
TSMFQDGHQL SNVQLDYKNN KAGCIISNDY FLKMKDMNGL SNNLFKESYF GNEQQHAFDL  120
NENLLSEDSY MNNAKTSIAF SGLAAAADAT NSSYISSNDM EHTDFQGLKL AYDGLTFKNS  180
ISGHDSNGNS FGHFSTDRMF ADGLPESAHS PSSNSSNKII ESNVSNTIGV SLKAKRSNYS  240
AEEEATPCQE ASKKPRVTSQ SSSTFMLKVR KEKLGDRISA LHRLVAPFGK TDTASVLTEA  300
IGYIQFLQDQ ILVIYPAILF SS*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754415e-85HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016560679.10.0PREDICTED: transcription factor bHLH110-like isoform X2
TrEMBLA0A1U8FY890.0A0A1U8FY89_CAPAN; Uncharacterized protein
TrEMBLA0A2G3AAI80.0A0A2G3AAI8_CAPAN; transcription factor bHLH110-like isoform X2
TrEMBLA0A2G3D7V50.0A0A2G3D7V5_CAPCH; Transcription factor
STRINGSolyc02g084880.2.11e-153(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA134431213
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.14e-23bHLH family protein