PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA02g22730
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 219aa    MW: 25562 Da    PI: 6.6172
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA02g22730genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.73e-1671384128
         NAM   4 GfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekew..yfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                 G+rFhPtd+e +  +L + v++++++ + +  +++d+y k ePw++  +   +++ +++++  yf +k+++++ +g+  n     g Wk++ k ++++ 
  CA02g22730   7 GYRFHPTDSEGL-TFLLRFVAKQEMHDSGFiTTNIDVYgKQEPWEIYsHgvpCAD-DDDSCyrYFITKKSNTTYHGEVGNT---LGSWKQQDKGQPIHY 100
                 9*********99.7888888888877777735566*99456*****733554333.4445523566666555555555444...499***********9 PP

         NAM  95 kkgel......vglkktLvfykgrapkgektdWvmheyrl 128
                 +kg+       +g+k+ + +  +++++     W+m+e++l
  CA02g22730 101 NKGNSssstpvIGCKRRMRYMIKDHKD--DGLWLMKEFEL 138
                 84444566777*********9554444..89*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.034161IPR003441NAC domain
SuperFamilySSF1019413.79E-175161IPR003441NAC domain
PfamPF023651.7E-117138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MEKKGLGYRF HPTDSEGLTF LLRFVAKQEM HDSGFITTNI DVYGKQEPWE IYSHGVPCAD  60
DDDSCYRYFI TKKSNTTYHG EVGNTLGSWK QQDKGQPIHY NKGNSSSSTP VIGCKRRMRY  120
MIKDHKDDGL WLMKEFELSN VILKRFDEDR RDYVLCAIKK KPIDTCPFEM NYDSDETDEV  180
TCSNDNDNTM YRNLLMMFLF WKISRVLLSC AFLLYSLH*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016560607.11e-134PREDICTED: protein NTM1-like 9
TrEMBLA0A2G3AAG11e-164A0A2G3AAG1_CAPAN; Uncharacterized protein
STRINGXP_009774958.14e-67(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.27e-08NAC 014