PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA03g03880

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 120aa MW: 13564.6 Da PI: 10.5272

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA03g03880	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	17.1	1e-05	49	87	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 RR i ++ +L+ l+P+ +k s a++Le Av++I+ L CA03g03880 49 RRTIIGGKLKKLQGLVPNM----DKQTSYADMLEIAVQHIQTL 87 78888889********7....688*************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	9.81E-10	49	103	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.73E-5	49	92	No hit	No description
Gene3D	G3DSA:4.10.280.10	3.7E-9	50	103	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 120 aa Download sequence Send to blast
MSWQPPSWKG VEKSKPPAVP SSKPNYFCAG PCEFRDFINS VSGPFKGMRR TIIGGKLKKL 60 QGLVPNMDKQ TSYADMLEIA VQHIQTLRDR VQRLNTEIDV RHQVNNSGMQ NRRKHLAED*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2G2Y243	2e-39	A0A2G2Y243_CAPAN; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA6455	23	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43140.2	9e-17	bHLH family protein