PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA03g34690

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 328aa MW: 36105.4 Da PI: 7.1697

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA03g34690	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.7	0.00024	225	263	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq CA03g34690 225 RKEKLGDRITALHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 263 5567778899999999887.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	9.883	213	262	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.09E-10	223	273	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.84E-6	225	267	No hit	No description
Gene3D	G3DSA:4.10.280.10	4.5E-8	227	270	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MHPHEYSHDH HHQQSSSSSS TTTTQHFYGS SNFLADNNLM SQDHLPRSWS QLLLAGLSCD 60 QEKSDISQFQ HQYKKLEDWE EIQNLXXXXX XXXXXNNNNN NNNNTPCSSN FRVPVVDVVK 120 PEMVGQLLYG NYQDLPATSS PASSCVTTNL GHSNIFNFSP SPNKITTTNK VVEPKHQHHP 180 DHSSECNSTS SGGVTKKARV QHSSAQPSLK AMPSFIYICL YVQVRKEKLG DRITALHQLV 240 SPFGKTDTAS VLSEAIGYIR FLQAQIQALS SPYMGNVAGS MGHTHQQSDL RSRGLCLVST 300 SCTQHVGSDN NTSVGDYWAP ALGGGYL*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016562699.1	0.0	PREDICTED: transcription factor bHLH68-like
TrEMBL	A0A2G3A3N4	0.0	A0A2G3A3N4_CAPAN; Transcription factor bHLH68
STRING	Solyc03g120530.2.1	1e-156	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1519	22	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	3e-42	bHLH family protein