PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA04g01650

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 209aa MW: 24079.9 Da PI: 8.4777

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA04g01650	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.6	4.5e-31	84	137	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+a+++LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+ CA04g01650 84 PRLRWTPQLHLSFVNAIHRLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 137 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	11.098	80	140	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.5E-28	80	138	IPR009057	Homeodomain-like
SuperFamily	SSF46689	3.76E-14	82	138	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	9.5E-23	84	139	IPR006447	Myb domain, plants
Pfam	PF00249	2.8E-9	85	136	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 209 aa Download sequence Send to blast
MEHGNGETSE EYYMEKVMSS IDLNEEVDHD HSKIQQIDDE AIEVISVESD KITNEENNSS 60 SCGNEINIKN EMSKVRQYVR SKLPRLRWTP QLHLSFVNAI HRLGGQERAT PKLVLQMMNV 120 RGLSIAHVKS HLQMYRSKKL GEFGQVLGHG HRANQRRNYL YGNLSQRSFN PLQDFKMKNG 180 AIVLARNFND DDNINHHFQN SFARTQSR*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	1e-18	85	139	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	1e-18	85	139	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A	1e-18	85	139	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	1e-18	85	139	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	1e-18	85	139	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	1e-18	85	139	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	1e-18	85	139	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	1e-18	85	139	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	1e-18	85	139	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	1e-18	85	139	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	1e-18	85	139	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	1e-18	85	139	4	58	Protein PHOSPHATE STARVATION RESPONSE 1
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Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016571767.1	1e-152	PREDICTED: uncharacterized protein LOC107869877 isoform X1
Refseq	XP_016571768.1	1e-154	PREDICTED: putative Myb family transcription factor At1g14600 isoform X2
TrEMBL	A0A1U8GSL4	1e-153	A0A1U8GSL4_CAPAN; putative Myb family transcription factor At1g14600 isoform X2
TrEMBL	A0A2G2ZL90	1e-151	A0A2G2ZL90_CAPAN; Uncharacterized protein
STRING	XP_009607761.1	2e-87	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5516	23	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	4e-38	G2-like family protein