PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g01780
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 108aa    MW: 11537 Da    PI: 9.82
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g01780genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP241.82.8e-13653256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr ++ +g++ A I+        ++ +lg f ta+eAa a++aa+ k++g+
  CA04g01780  6 RYRGVRKRS-WGKYQADIWI------GTTKYLGMFNTAKEAALAYDAAAIKFRGA 53
                6*****888.**********......69************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.9E-7652IPR001471AP2/ERF domain
CDDcd000182.09E-13661No hitNo description
SMARTSM003801.8E-23666IPR001471AP2/ERF domain
PROSITE profilePS5103217.517660IPR001471AP2/ERF domain
SuperFamilySSF541715.23E-18661IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.9E-21660IPR001471AP2/ERF domain
PRINTSPR003671.3E-12718IPR001471AP2/ERF domain
PRINTSPR003671.3E-124262IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    Send to blast
MTEEVRYRGV RKRSWGKYQA DIWIGTTKYL GMFNTAKEAA LAYDAAAIKF RGAKAKTNFP  60
IPRLRNSAGG GTGDGGVAAV ASESESSSLQ SRGIEIDLNL PPPPEDM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-113601172Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016571274.11e-73PREDICTED: ethylene-responsive transcription factor 4-like
SwissprotQ9ZWA24e-18ERF77_ARATH; Ethylene-responsive transcription factor 10
TrEMBLA0A1U8GT413e-72A0A1U8GT41_CAPAN; Ethylene-responsive transcription factor 9
TrEMBLA0A2G2ZLL03e-72A0A2G2ZLL0_CAPAN; ethylene-responsive transcription factor 4-like
STRINGAES998192e-19(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.15e-13ERF domain protein 10
Publications ? help Back to Top
  1. Lehmeyer M, et al.
    Functional dissection of a strong and specific microbe-associated molecular pattern-responsive synthetic promoter.
    Plant Biotechnol. J., 2016. 14(1): p. 61-71
    [PMID:25819608]