PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g07350
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 248aa    MW: 27037 Da    PI: 5.2662
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g07350genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-183988255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  CA04g07350 39 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 88
                8*****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.4E-113988IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.3E-283998IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-183996IPR016177DNA-binding domain
PROSITE profilePS5103221.723998IPR001471AP2/ERF domain
SMARTSM003805.6E-3239102IPR001471AP2/ERF domain
PRINTSPR003671.7E-84051IPR001471AP2/ERF domain
CDDcd000181.89E-164298No hitNo description
PRINTSPR003671.7E-86278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MVKTEQKSLA EPSKTSMSLS SSSSTSSSNN YNMKMKKNKY KGVRMRSWGS WVSEIRAPNQ  60
KTRIWLGSYS TPEAAARAYD AALLCLKGPS ASHNLNFPFD SSFYHHIDHT STTLSPKAIQ  120
RVAAAAAATA EGGGNQNIGS VSLFDDTNLI LSSPSPPLSS KSTSSSSPLS HADQFDDFCL  180
LQNYSTAATT ATFDQEITAV SMIEQWYNFD SPKYSDMLDG TVFFDPPSME DIYYEEGSAD  240
IPLWSFC*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754502e-40HG975450.1 Solanum pennellii chromosome ch11, complete genome.
GenBankHG9755232e-40HG975523.1 Solanum lycopersicum chromosome ch11, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016570134.10.0PREDICTED: ethylene-responsive transcription factor ERF014
TrEMBLA0A1U8GPT90.0A0A1U8GPT9_CAPAN; Ethylene-responsive transcription factor
TrEMBLA0A2G2ZMW00.0A0A2G2ZMW0_CAPAN; ethylene-responsive transcription factor ERF014
STRINGPGSC0003DMT4000023752e-90(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61772435
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.16e-31ERF family protein