PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g18620
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 438aa    MW: 46347.9 Da    PI: 9.4022
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g18620genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.71.7e-15375418548
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++eN++L+k+
  CA04g18620 375 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKK 418
                 79**************************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.3E-14371435IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.3373418IPR004827Basic-leucine zipper domain
CDDcd147071.26E-27375420No hitNo description
PfamPF001702.7E-13375418IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.2E-16375419No hitNo description
SuperFamilySSF579594.31E-12375420No hitNo description
PROSITE patternPS000360378393IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MGSNYNFKNF GNEPPGEGGS GGCGKQPGNF QLPRQSSIYS LTFDEFLSST GGIGKDFGSM  60
NMDELLKNIW SAEESQTMGG TGIGGQEVGV SGGHLQRQGS LTLPRTLSQK TVDEVWRDMS  120
KEHGGGGGGG KDGNSIGVPP NMPQRQQTLG EITLEEFLVR AGVVREDAQL AAKSNNAGGI  180
FADLSYAGNN TGLAFGYQQP NRNTGLMAGS IPNKNGESVI QSANLPLNVN GVRSTQQQLR  240
PQQLQQNQQP QPQPQPQPQQ QPIFPKQPAL PYGAPMAVPN SVQLGSPGLR AGMAGIADPA  300
LNSNFIQGAN LMGGGMNMVG LGAGGVTVAT ASPGVSSDGL GKSNGDTPSV SPVPYVFNGG  360
LRGRKYSTVE KVVERRQRRM IKNRESAARS RARKQAYTME LEAEVAKLKE ENEELQKKQV  420
TFYAITLQVL SVSMVHD*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF4422690.0KF442269.1 Solanum nigrum AREB-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016568771.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
RefseqXP_016568772.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
RefseqXP_016568773.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5
SwissprotQ9M7Q41e-117AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A1U8GBR90.0A0A1U8GBR9_CAPAN; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A1U8GJ680.0A0A1U8GJ68_CAPAN; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRINGSolyc04g078840.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.15e-87abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]