PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g21430
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TALE
Protein Properties Length: 432aa    MW: 48629.8 Da    PI: 6.7253
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g21430genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.52.6e-093583951954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yp+ +e+  L++++gL+++qV++WF N R +
  CA04g21430 358 FEHflHPYPNDSEKLMLSSQTGLSKNQVSNWFINARVR 395
                 554459******************************88 PP
2BELL98.36e-32221292172
        BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 er+el  k+ kL+ lleeV++rY+qy++ ++ v s Fe++ag gs kpYt+lAl+a+SrhF +L+dai++qi
  CA04g21430 221 ERHELYVKIMKLMALLEEVERRYEQYYQHMEEVTSTFEVIAGFGSGKPYTALALQAMSRHFCSLRDAIISQI 292
                 799********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.8E-25152290IPR006563POX domain
PfamPF075263.0E-36158288IPR006563POX domain
PROSITE profilePS5007111.693336399IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.5E-26338413IPR009057Homeodomain-like
CDDcd000861.41E-10339400No hitNo description
SMARTSM003894.2E-9339403IPR001356Homeobox domain
SuperFamilySSF466894.28E-17345406IPR009057Homeodomain-like
PfamPF059207.9E-17356395IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MVSKDSPPPS HSSILHQFIN SDSITSQIGS QHFDIYQSDL SGNTTSSTNT AYQPHHGVLS  60
RSIEFVNPPH FTTDSDVSNS RHLMDLLGAS HDANQQAQRL SLSLGSHSLV SSLSSSFANP  120
SYMNQEIDQR NNEFSFSAAA MNQSFPTVCG TESFVSAIGT SKYLKPTQSL LEELVCIGGK  180
SIDLSNEKFI RRLSRNSKKG SLSLRVMLKG EIPPSNELFN ERHELYVKIM KLMALLEEVE  240
RRYEQYYQHM EEVTSTFEVI AGFGSGKPYT ALALQAMSRH FCSLRDAIIS QINVIRLKMP  300
RDVPKISSGL SHLSLFEKET LQNRMSLQQL GIIQSNRAWR PIRGLPETSV AILRSWLFEH  360
FLHPYPNDSE KLMLSSQTGL SKNQVSNWFI NARVRLWKPM IEEMYKEEFA ESSVESDHLL  420
NREGVTDSAE E*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A2e-15345403563Homeobox protein Meis2
3k2a_B2e-15345403563Homeobox protein Meis2
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3759650.0AF375965.1 Lycopersicon esculentum bell-like homeodomain protein 1 (BL1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016571427.10.0PREDICTED: BEL1-like homeodomain protein 11 isoform X1
RefseqXP_016571428.10.0PREDICTED: BEL1-like homeodomain protein 11 isoform X1
SwissprotQ1PFD12e-97BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLA0A1U8GJG30.0A0A1U8GJG3_CAPAN; BEL1-like homeodomain protein 11 isoform X1
TrEMBLA0A2G3AXA50.0A0A2G3AXA5_CAPCH; BEL1-like homeodomain protein 11
STRINGXP_009761064.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA86022228
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-92BEL1-like homeodomain 11