PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA05g11500
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 190aa    MW: 21280.2 Da    PI: 4.5395
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA05g11500genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.18.6e-192078257
                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS
        WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57
                +Dgy+WrKYGqK + g+++pr  YrC  +     +++k v+rs+ +p  +e+tY g+  
  CA05g11500 20 EDGYSWRKYGQKLIVGAKYPREHYRCDCRrlsYREATKMVQRSEAEPLSFEVTYGGSNS 78
                7*************************9987777899******************99866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-18880IPR003657WRKY domain
PROSITE profilePS5081116.4091478IPR003657WRKY domain
SuperFamilySSF1182901.57E-161681IPR003657WRKY domain
SMARTSM007743.6E-161981IPR003657WRKY domain
PfamPF031069.3E-172079IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
CWHERQEYIQ ARSGEEVPPE DGYSWRKYGQ KLIVGAKYPR EHYRCDCRRL SYREATKMVQ  60
RSEAEPLSFE VTYGGSNSCG QENKNQNGEH VVLTKETQRD EVGRAAGETP ECYTPEMVST  120
PNTSFNNSSA GVVFSNSNPV FNITNSDLIP TPTSSPYPDT DISLEDDSLT VLFDDVPENA  180
RSTYKCNAN*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016578846.11e-141PREDICTED: probable WRKY transcription factor 41
TrEMBLA0A1U8H5S11e-139A0A1U8H5S1_CAPAN; probable WRKY transcription factor 41
STRINGPGSC0003DMT4000842142e-73(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA120611123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.25e-22WRKY family protein