PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA05g12080
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 190aa    MW: 21629.1 Da    PI: 10.6852
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA05g12080genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.33.9e-1890140256
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  y+GVr ++ +g+Wv+eIr+p++   + r++lg++ ta +Aa+a++ a+++++g+
  CA05g12080  90 TYRGVRKRS-WGKWVSEIREPKK---KSRIWLGTYPTARMAARAHDVAALAIKGH 140
                 69****888.**********854...6***********************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103222.53790147IPR001471AP2/ERF domain
PfamPF008471.2E-1290140IPR001471AP2/ERF domain
SMARTSM003803.1E-3290153IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-2090148IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-3090148IPR001471AP2/ERF domain
PRINTSPR003674.0E-1091102IPR001471AP2/ERF domain
CDDcd000184.47E-2991149No hitNo description
PRINTSPR003674.0E-10113129IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    Send to blast
MENQEDIISL EILADHDHHD VFSNSSCNGL NSPSSTVTSS LSSSSSFSPS NAPILEKYQS  60
LRKIQEVVKN NKNEKMKKKK RNGDDDKHPT YRGVRKRSWG KWVSEIREPK KKSRIWLGTY  120
PTARMAARAH DVAALAIKGH TIYLNFPHLA DQYPRPSSSS PKDIQXSCHH IFWRKCGRRR  180
RNSSRAQPN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-17871481173Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00312DAPTransfer from AT2G44940Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9755173e-60HG975517.1 Solanum lycopersicum chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574677.11e-118PREDICTED: ethylene-responsive transcription factor ERF038-like isoform X1
TrEMBLA0A2G2ZIN71e-137A0A2G2ZIN7_CAPAN; Dehydration-responsive element-binding protein 3
STRINGXP_009791350.12e-52(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21224225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-33ERF family protein