PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA05g16160

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WRKY

Protein Properties

Length: 132aa MW: 14632.5 Da PI: 9.3031

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA05g16160	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	43.7	5.6e-14	5	46	18	59
-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 18 sefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 s r+YYrCt+++C+vkk++ers +d+++v+ t+eg+H+h+ CA05g16160 5 SCACRNYYRCTTTSCTVKKRMERSIQDTSIVVKTNEGTHTHH 46 6678*************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00774	4.5E-5	1	47	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	3.3E-10	4	48	IPR003657	WRKY domain
SuperFamily	SSF118290	2.35E-10	5	48	IPR003657	WRKY domain
Pfam	PF03106	1.3E-7	7	46	IPR003657	WRKY domain
PROSITE profile	PS50811	14.527	9	48	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 132 aa Download sequence Send to blast
MHKMSCACRN YYRCTTTSCT VKKRMERSIQ DTSIVVKTNE GTHTHHCPVQ RRIQNFISAL 60 GTVTPKGYVG VQTVTTNYDG VIGGGDSRGR TCYGDSSSLF STNNSLQERR FRSSFSSLNE 120 DYGLIQAMMP L*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015167977.1	3e-34	PREDICTED: probable WRKY transcription factor 48 isoform X1
TrEMBL	A0A2G2ZJR7	6e-93	A0A2G2ZJR7_CAPAN; Uncharacterized protein
STRING	PGSC0003DMT400069966	5e-32	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1309	24	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47260.1	8e-14	WRKY DNA-binding protein 23