PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA06g02260
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 179aa    MW: 20664.2 Da    PI: 4.8333
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA06g02260genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.91.7e-1481343128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  GfrFhP+d e +  +L+k +++++++ + +  +++d+y++  ePw++ +    +  a ++++y ++ ++k          + + g Wk +g+ k+v++
  CA06g02260   8 SGFRFHPNDTEGL-TFLQKFMAKQEMNDSGFiTTNIDVYDSeeEPWKIYSrgvpC-GAVDDSLYRYFITKK----------SSNLGNWKLQGEGKPVYR 94 
                 7**********99.99*********99988834556***88668****7334432.223334443322222..........234699***********9 PP

         NAM  95 k...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128
                     ++ ++g+kk + +    +++ ++     W+m+ey+l
  CA06g02260  95 DsssSTVVIGCKKKMSYMinnNEELREDDGRYWLMKEYEL 134
                 86555566**********54322333344567******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.63E-195157IPR003441NAC domain
PROSITE profilePS5100518.486157IPR003441NAC domain
PfamPF023656.1E-118134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MEQKGVSSGF RFHPNDTEGL TFLQKFMAKQ EMNDSGFITT NIDVYDSEEE PWKIYSRGVP  60
CGAVDDSLYR YFITKKSSNL GNWKLQGEGK PVYRDSSSST VVIGCKKKMS YMINNNEELR  120
EDDGRYWLMK EYELSNVILH HFDDDRRDYV LCAIKKKLIE TCFSEIENVS EEFGAIQV*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016560607.13e-68PREDICTED: protein NTM1-like 9
TrEMBLA0A2G2Z7571e-130A0A2G2Z757_CAPAN; Uncharacterized protein
STRINGXP_009631312.13e-52(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.13e-09NAC domain containing protein 57