PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA06g04950

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 212aa MW: 24630.4 Da PI: 9.1311

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA06g04950	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	30.3	7.7e-10	65	116	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + h +Er RR+++ + ++Lr+ l + +++K s ++ + Av+YIk+L+ CA06g04950 65 KILHRDIERHRRHEMATLCATLRSNLSYeS---TKGKRSLSDHMQGAVNYIKHLE 116 6679**********************66...******************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.63E-5	62	120	No hit	No description
PROSITE profile	PS50888	11.611	63	115	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	1.83E-10	63	129	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.0E-7	65	116	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.8E-7	66	130	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 212 aa Download sequence Send to blast
MDCLSEIFCS QKIKDHGKQL IQIPSTPSQP HHQDLVKNDS NYKKKRQAND NERDSLIRKN 60 LVEKKILHRD IERHRRHEMA TLCATLRSNL SYESTKGKRS LSDHMQGAVN YIKHLENNIK 120 ELEIKRKKLE NLALCPSKDD KCFRDYVTIN SCDCGVEILI NERVSLSRVL KELVKRQLNV 180 VSCVSTKLDE RLLHRIQLEV YCMSISFESL N*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016577211.1	1e-142	PREDICTED: transcription factor bHLH118-like
TrEMBL	A0A2G2Z8C2	1e-141	A0A2G2Z8C2_CAPAN; Uncharacterized protein
STRING	PGSC0003DMT400027293	1e-109	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	2e-22	bHLH family protein