PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA06g11200
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 191aa    MW: 21852 Da    PI: 8.8217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA06g11200genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP239.71.2e-12948144
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAak 44
                ++ykG+r +k +g+Wv+e+r p++   r r++lg+++tae+ ++
  CA06g11200  9 PKYKGIRLRK-WGKWVSEVRLPNS---RERIWLGSYDTAEKXRR 48
                79******99.*******999833...5**********998776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.29E-14961No hitNo description
PfamPF008471.2E-6946IPR001471AP2/ERF domain
SMARTSM003809.4E-71062IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.8E-161048IPR001471AP2/ERF domain
PROSITE profilePS5103213.7221053IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-101048IPR016177DNA-binding domain
PRINTSPR003671.7E-71122IPR001471AP2/ERF domain
PRINTSPR003671.7E-73349IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    Send to blast
MENGGPSQPK YKGIRLRKWG KWVSEVRLPN SRERIWLGSY DTAEKXRRSS ASAGRKPSLT  60
FLIVRRTYLY PTDKGFRLRR YRLLQLVVQM DTNNNSTATA AMAWASFDMW EDYPHHAIGP  120
PPDLFCDPHS SYAGTNYDSG YYPAGVLDSL SSNLYSPPHF PQRVTHNYDD DDTGNGGDEH  180
YPQQSFLWNF *
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754453e-45HG975445.1 Solanum pennellii chromosome ch06, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016577117.11e-62PREDICTED: ethylene-responsive transcription factor ERF016-like
TrEMBLA0A2G2Z9R21e-84A0A2G2Z9R2_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000790944e-41(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.13e-19ERF family protein