PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA07g08390

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 110aa MW: 12813 Da PI: 11.1422

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA07g08390	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.9	2e-32	27	79	2	54
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 prlrWtpeLHe F+eav+ LGG +kAtPk+i ++m+vkgLt++hvkSHLQ+YR CA07g08390 27 PRLRWTPELHELFIEAVQLLGGGHKATPKRIQQMMEVKGLTISHVKSHLQMYR 79 8**************************************************** PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	15.914	23	83	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	2.4E-29	24	81	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.6E-26	27	80	IPR006447	Myb domain, plants
SuperFamily	SSF46689	1.37E-18	27	83	IPR009057	Homeodomain-like
Pfam	PF00249	1.2E-12	28	79	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 110 aa Download sequence Send to blast
MMEYFSMMKK RSSHKIGVRQ YKKSSVPRLR WTPELHELFI EAVQLLGGGH KATPKRIQQM 60 MEVKGLTISH VKSHLQMYRN LKERASPNIV SSVNNFLEER PQFSWSSPR*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-20	28	84	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-20	28	84	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-20	28	84	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-20	28	84	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-20	28	84	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-20	28	84	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-20	28	84	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-20	28	84	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Putative transcription factor.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016579369.1	6e-74	PREDICTED: probable transcription factor KAN3
Swissprot	Q700D9	4e-26	MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBL	A0A2G2Z1N1	7e-74	A0A2G2Z1N1_CAPAN; Uncharacterized protein
STRING	PGSC0003DMT400002410	5e-48	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA9459	13	25

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	2e-29	G2-like family protein