PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g10930
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 533aa    MW: 59095.4 Da    PI: 6.7537
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g10930genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.53.1e-29241298260
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 +DgynWrKYGqK v+g+ f+rsYY+Ct+++C +kk+vers+ d+++++i Y  +H+h+k
  CA07g10930 241 EDGYNWRKYGQKLVRGNMFTRSYYKCTHSNCLAKKQVERSH-DGHITNIQYITNHEHPK 298
                 7****************************************.***************85 PP
2WRKY1079.7e-34440498159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 l+Dgy+WrKYGqK vkg+++prsYYrC+sagCp+kk+ver+++dpk+v++tYeg+H+h+
  CA07g10930 440 LNDGYRWRKYGQKFVKGNPNPRSYYRCSSAGCPAKKHVERASHDPKLVITTYEGQHEHD 498
                 58********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081121.654235299IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.4E-25236299IPR003657WRKY domain
SuperFamilySSF1182902.22E-23238299IPR003657WRKY domain
SMARTSM007742.8E-30240298IPR003657WRKY domain
PfamPF031062.7E-22241297IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-36426500IPR003657WRKY domain
SuperFamilySSF1182902.09E-29432500IPR003657WRKY domain
PROSITE profilePS5081136.587435500IPR003657WRKY domain
SMARTSM007749.1E-40440499IPR003657WRKY domain
PfamPF031063.7E-27441497IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    Send to blast
MGISEDDMTD EISSRKLKQK QDPDTVINGS ESKEKGTCES MSAEVVSNEL HKRPNPDALA  60
KVSQSNRDES AHPTTCQGVL NEGQPRRNVD KEIDVSQSNQ KDSSLSNVPE ENSENVHQEK  120
GPESEGGASE SSRVSVLPKE EPYIKSCKSD SPVKEGNISL VVGTASDCSP QIQSKKMEEV  180
VSQSHQERVT YSTMAENAMY KLRPRRNPDT SVQDLPSDEG VRDLPSDQGV TPFSEPEKPF  240
EDGYNWRKYG QKLVRGNMFT RSYYKCTHSN CLAKKQVERS HDGHITNIQY ITNHEHPKPL  300
NSPQISPEVV VPSEMRRPDM LMGTPQAEGE KSTALGQACE SIEPLESLIS AAVESAGGSA  360
RDTVPKSLKS GDEGDSNGGR NSKRRYVKVK IFFICRHCSV LQLPCDRKKE VPRSDDMTPP  420
MKSHSEPRHI VQTRSEVDIL NDGYRWRKYG QKFVKGNPNP RSYYRCSSAG CPAKKHVERA  480
SHDPKLVITT YEGQHEHDIP LSRTVAQNSD SNTTRISGES TAESGGNKHV DN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-33428500274WRKY transcription factor 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754461e-131HG975446.1 Solanum pennellii chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016580535.10.0PREDICTED: probable WRKY transcription factor 20 isoform X1
RefseqXP_016580537.10.0PREDICTED: probable WRKY transcription factor 20 isoform X3
RefseqXP_016580538.10.0PREDICTED: probable WRKY transcription factor 20 isoform X3
TrEMBLA0A1U8HAR70.0A0A1U8HAR7_CAPAN; Putative WRKY transcription factor 20
TrEMBLA0A1U8HAZ20.0A0A1U8HAZ2_CAPAN; probable WRKY transcription factor 20 isoform X1
TrEMBLA0A2G2Z2P00.0A0A2G2Z2P0_CAPAN; probable WRKY transcription factor 20 isoform X3
STRINGSolyc07g047960.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45582242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.25e-67zinc-dependent activator protein-1