PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g12980
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 167aa    MW: 18548.1 Da    PI: 4.6864
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g12980genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding285.2e-091232447
                     HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                     W++Ia++++ gR+++++k++w++ 
       CA07g12980  1 WSAIAAHLP-GRSDNEIKNHWHTT 23
                     *********.***********986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129416.5128IPR017930Myb domain
CDDcd001679.61E-7124No hitNo description
Gene3DG3DSA:1.10.10.605.8E-11125IPR009057Homeodomain-like
PfamPF002499.1E-7123IPR001005SANT/Myb domain
SuperFamilySSF466894.08E-7134IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
WSAIAAHLPG RSDNEIKNHW HTTLKKHATH NATNSSSDKS SKKCSNNKNK NTKSNASKDA  60
SPNNNMHENA ILESSEWSPK ESLSDQELIS SYSTSVDYQN DVFQEENLVE ITSGSFWTEP  120
FVVESFNSPR IDFLGPPSID YGLVCPPSPF IGEGFVSSFD LDDYNW*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016579456.11e-118PREDICTED: myb-related protein Myb4-like
TrEMBLA0A2G2Z3I01e-117A0A2G2Z3I0_CAPAN; Myb-related protein (Fragment)
STRINGSolyc07g053230.2.12e-50(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA12242154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.22e-09myb domain protein 15