PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g16720
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 180aa    MW: 20732.3 Da    PI: 10.3881
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g16720genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.3e-103582554
                HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH  5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                   +Er+RR+++ + +++Lr l+P+       +K s ++ Le+ v+Y+k+L
  CA07g16720 35 RRDVERQRRRDMAKLYQRLRLLIPSkY---LMGKRSISDHLEQIVDYVKDL 82
                5689*********************77...9******************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-102999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.0233082IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-734100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.3E-83582IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MKKKPIKITN INNDDQVQNP RKEKEMIAEK KKVLRRDVER QRRRDMAKLY QRLRLLIPSK  60
YLMGKRSISD HLEQIVDYVK DLRKDIEDLE RKREALKQLK STICSSQLAP SSSSMKLNDD  120
NEDRIIVKSC NEGVKICIKG ELSLSKVLKV VMKEGFIVSS CVSSTVDQSL FHIIQSKVS*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016579519.13e-88PREDICTED: transcription factor bHLH125-like
TrEMBLA0A2G2Z4R71e-121A0A2G2Z4R7_CAPAN; Uncharacterized protein
STRINGSolyc07g062200.1.11e-76(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA128311118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12540.13e-18bHLH family protein