PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g16790
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 155aa    MW: 18151.9 Da    PI: 9.7739
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g16790genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.83.4e-26151363128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
                  GfrFhPtd el+ +yL   v +k+++    i   d+y++ePwd+  k  ++++ +yfF++ +kk++ ++r  r++ +g Wk++ k k+v+s+kg+  g
  CA07g16790  15 EGFRFHPTDRELM-KYLILFVISKPFSKLVPIVLEDLYTIEPWDIF-K-GKKDRALYFFTELKKKKTGNTRYVRSVGEGSWKSQDKGKAVCSEKGSILG 110
                 7************.9**********9997779999**********6.3.3567899******************************************* PP

         NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                  k++L + +   p  +  +W+m+ey++
  CA07g16790 111 YKRSLRYQNPGLPL-HDGQWLMKEYSI 136
                 *******9655555.799*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.22213154IPR003441NAC domain
SuperFamilySSF1019414.58E-2513143IPR003441NAC domain
PfamPF023651.3E-1515136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    Send to blast
MEYNKEVEEN SAHTEGFRFH PTDRELMKYL ILFVISKPFS KLVPIVLEDL YTIEPWDIFK  60
GKKDRALYFF TELKKKKTGN TRYVRSVGEG SWKSQDKGKA VCSEKGSILG YKRSLRYQNP  120
GLPLHDGQWL MKEYSICDDV KKHLRQRFHV CSHS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-1311363140Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016579194.18e-97PREDICTED: NAC domain-containing protein 30-like
TrEMBLA0A2G2Z4Y11e-111A0A2G2Z4Y1_CAPAN; Uncharacterized protein
STRINGXP_009769005.13e-66(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.12e-22NAC domain containing protein 96