PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g19830
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 213aa    MW: 23546.5 Da    PI: 6.0217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g19830genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.3e-201160255
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +++GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  CA07g19830 11 RFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARTLRG 60
                69*******.**********883....5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.2E-361174IPR001471AP2/ERF domain
PfamPF008479.6E-131160IPR001471AP2/ERF domain
PROSITE profilePS5103223.2351168IPR001471AP2/ERF domain
CDDcd000181.57E-181168No hitNo description
Gene3DG3DSA:3.30.730.101.2E-311169IPR001471AP2/ERF domain
PRINTSPR003672.5E-101223IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-221269IPR016177DNA-binding domain
PRINTSPR003672.5E-103450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
INGSGGSKEV RFRGVRKRPW GRFAAEIRDP WKKTRVWLGT FDSAEDAARA YDAAARTLRG  60
PKAKTNFPSD TTNNNNLLQY ANHFHHHEMN VNVNDALVDS RLYPQDHHHI ISQRPTSSSM  120
SSTVEXRQDT AAPSRKYPRS PPVVPDDCHS DCDSSSSVID DGDGENDNVN IASSSFRKLL  180
PFDLNFPPPM DDSVGDDAYA DADDLHCTAL CL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A7e-211268360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A8e-21768163ATERF1
3gcc_A8e-21768163ATERF1
5wx9_A2e-20677981Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Probably acts as a transcriptional repressor and may regulate other AtERFs (By similarity). {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6756913e-73AB675691.1 Solanum lycopersicum SlERF7 mRNA for ethylene responsive factor, complete cds.
GenBankHG9754463e-73HG975446.1 Solanum pennellii chromosome ch07, complete genome.
GenBankHG9755193e-73HG975519.1 Solanum lycopersicum chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016581345.11e-113PREDICTED: ethylene-responsive transcription factor 3
SwissprotQ9SXS88e-69ERF3_TOBAC; Ethylene-responsive transcription factor 3
TrEMBLA0A2G2Z5P01e-150A0A2G2Z5P0_CAPAN; Ethylene-responsive transcription factor 3
STRINGPGSC0003DMT4000574432e-86(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA33302347
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-34ethylene responsive element binding factor 3