PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA08g06790
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 220aa    MW: 25506.1 Da    PI: 8.7752
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA08g06790genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM66.86.1e-21111393128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 +G+rFhPt  e++ +yL   +++++l+ ++  ++evd+y   ePw++  +   +++  y  ++ +kk+a + r++r++ +g W+ + k kev+++kg+l
  CA08g06790  11 MGYRFHPTHTEVL-KYLLGFARNDPLPKQNKlMQEVDLYGDkEPWQIF-E-GDNTNTHYCIAQLKKKKADSIRTERSAGKGKWNPQCKAKEVFDHKGRL 106
                 7**********99.999999**9997776666******97549****5.2.2334567999999999999***************************** PP

         NAM 100 vglkktLvfy....kgrapkgektdWvmheyrl 128
                 +g  k+L +     ++++ k+   +W+m ey+l
  CA08g06790 107 MGYVKSLKYIprtaHKSSIKAAYGEWLMTEYSL 139
                 **********765445555667889******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.89E-228158IPR003441NAC domain
PROSITE profilePS5100523.819158IPR003441NAC domain
PfamPF023655.4E-1011139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MSWYKQTCSI MGYRFHPTHT EVLKYLLGFA RNDPLPKQNK LMQEVDLYGD KEPWQIFEGD  60
NTNTHYCIAQ LKKKKADSIR TERSAGKGKW NPQCKAKEVF DHKGRLMGYV KSLKYIPRTA  120
HKSSIKAAYG EWLMTEYSLR YSQDIKKKDY VICKIKKKKE NDSDKQKRVA NDDENMSDIE  180
EYIDSVLKEE DLNHDLAVNS KHELALAGSI DLDAIDFVL*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016581802.11e-153PREDICTED: protein CUP-SHAPED COTYLEDON 1-like
TrEMBLA0A2G2YXK31e-162A0A2G2YXK3_CAPAN; Uncharacterized protein
STRINGXP_009762991.12e-57(Nicotiana sylvestris)
STRINGXP_009598748.17e-58(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.12e-09NAC-domain protein 101