PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA08g14240
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 114aa    MW: 12892.8 Da    PI: 8.5059
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA08g14240genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer57.62.8e-18352454
  ZF-HD_dimer  4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHR 54
                 ++Y  Clk hA + G   vDGC+Ef++s g++gt++a  Ca CgC R FH 
   CA08g14240  3 IKYGVCLKSHATKFGHFEVDGCREFVKS-GDDGTKEAYICANCGCIRGFHQ 52
                 78*************************9.999******************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257741.0E-9252IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047701.2E-18352IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PROSITE profilePS5152317.05554IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MVIKYGVCLK SHATKFGHFE VDGCREFVKS GDDGTKEAYI CANCGCIRGF HQINNPLLHH  60
YQAIKFRFLH NGVIPQGENV SISRPFMREI FFTRTPQVSF PNSLPDLIRD PVH*
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754406e-39HG975440.1 Solanum pennellii chromosome ch01, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022973076.11e-15mini zinc finger protein 3-like
TrEMBLA0A2G2Y2G13e-79A0A2G2Y2G1_CAPAN; Mini zinc finger protein 2
STRINGSolyc05g018740.1.14e-32(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13748615
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.12e-14mini zinc finger 2