PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA08g17390

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Nin-like

Protein Properties

Length: 675aa MW: 75510.1 Da PI: 6.3084

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA08g17390	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	51.7	1.7e-16	434	478	4	48
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 +++l+ l+++F +++dAA++Lgv+ ++ KriCRq GI RWP+ k CA08g17390 434 KVTLQFLKQFFGRNLNDAANCLGVSRSTFKRICRQQGIFRWPRMK 478 7899**************************************866 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.23	415	502	IPR003035	RWP-RK domain
Pfam	PF02042	2.2E-14	434	478	IPR003035	RWP-RK domain
Gene3D	G3DSA:3.10.20.240	1.1E-14	587	669	No hit	No description
SuperFamily	SSF54277	1.67E-14	587	669	No hit	No description
SMART	SM00666	3.5E-15	590	672	IPR000270	PB1 domain
PROSITE profile	PS51745	17.361	590	672	IPR000270	PB1 domain
CDD	cd05992	3.49E-14	592	669	No hit	No description
Pfam	PF00564	8.2E-15	592	670	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence Send to blast
MSPCSIKERI CEALRYIDSM GEVILIQFWA PVKVNSQFVL ATSGQPFVGG DSTIAILQYR 60 MISLMYAFSV DGTDDGCIGL PGRVFMTKFP EWTPNVQYYS SKEFPQLDHA LNYNIRGTLA 120 LPVFEGEICV GVLELVMTSQ KINYAPEFDK VCKALEATNL KSTGTFDQQA TWIYNEDFKI 180 AQSEILELFL AVCETHKLPL AQTWLPQRHQ NAMICGKRFS GLTCVPSFAF YVTDAHMWGF 240 REACLEHHLQ DEQGLPGRAF SSLNACFCAD ISLFCKSEYP LVHYARMFGL QSSLTVPVCN 300 NHSEKDTYVL EFFLPHSSTD HKIQLQIAAS ILATTKESLQ NSKVIQWIEP KVEGNFEIID 360 LSVGKKLRLS PVPELNSQTI DTRHGPETSQ SGHVSKEQDF SMQQSSECDV ALLKARSDAN 420 AENITFSIFE KDGKVTLQFL KQFFGRNLND AANCLGVSRS TFKRICRQQG IFRWPRMKKT 480 STTNCFHRIT EHVNEAAQMV EEASTSASLA QDPMPGFGST SSTNMKNPVH HGLLFKQVQA 540 TTFAPGTREM QTDKSNTSVT LSSFGISIGA DKQVPESRIP SVAALQNGET ATIKARYGEY 600 FIKFKLPFSS QLAELENKVA DRLKLKIGTF RIQYQDADDD WIIIACNDDL ESCLSERRSL 660 GDKAIKMLVE SIDM*

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence Send to blast

MSPCSIKERI CEALRYIDSM GEVILIQFWA PVKVNSQFVL ATSGQPFVGG DSTIAILQYR  60
MISLMYAFSV DGTDDGCIGL PGRVFMTKFP EWTPNVQYYS SKEFPQLDHA LNYNIRGTLA  120
LPVFEGEICV GVLELVMTSQ KINYAPEFDK VCKALEATNL KSTGTFDQQA TWIYNEDFKI  180
AQSEILELFL AVCETHKLPL AQTWLPQRHQ NAMICGKRFS GLTCVPSFAF YVTDAHMWGF  240
REACLEHHLQ DEQGLPGRAF SSLNACFCAD ISLFCKSEYP LVHYARMFGL QSSLTVPVCN  300
NHSEKDTYVL EFFLPHSSTD HKIQLQIAAS ILATTKESLQ NSKVIQWIEP KVEGNFEIID  360
LSVGKKLRLS PVPELNSQTI DTRHGPETSQ SGHVSKEQDF SMQQSSECDV ALLKARSDAN  420
AENITFSIFE KDGKVTLQFL KQFFGRNLND AANCLGVSRS TFKRICRQQG IFRWPRMKKT  480
STTNCFHRIT EHVNEAAQMV EEASTSASLA QDPMPGFGST SSTNMKNPVH HGLLFKQVQA  540
TTFAPGTREM QTDKSNTSVT LSSFGISIGA DKQVPESRIP SVAALQNGET ATIKARYGEY  600
FIKFKLPFSS QLAELENKVA DRLKLKIGTF RIQYQDADDD WIIIACNDDL ESCLSERRSL  660
GDKAIKMLVE SIDM*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016543754.1	0.0	PREDICTED: protein NLP7-like
TrEMBL	A0A1U8EIP5	0.0	A0A1U8EIP5_CAPAN; protein NLP7-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA12836	2	19

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-145	Nin-like family protein