PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA09g14010
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 637aa    MW: 70274.1 Da    PI: 7.0202
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA09g14010genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.71.3e-29222278259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +DgynWrKYGqK v+g+e++rsYY+Ct+++C++kk+vers+ d+++++i+Y g+H+h+
  CA09g14010 222 EDGYNWRKYGQKLVRGNEYTRSYYKCTYPNCQAKKQVERSH-DGHITDIHYIGKHEHP 278
                 7****************************************.***************8 PP
2WRKY99.91.6e-31430487259
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                 +Dg +WrKYGqK vkg+++prsYYrC+ agCpvkk+ver+++dpkvv++tYeg+H h+
  CA09g14010 430 NDGQRWRKYGQKIVKGNPNPRSYYRCSVAGCPVKKHVERASHDPKVVITTYEGQHVHN 487
                 8*******************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-26215278IPR003657WRKY domain
PROSITE profilePS5081121.104216280IPR003657WRKY domain
SuperFamilySSF1182906.8E-24217278IPR003657WRKY domain
SMARTSM007743.9E-32221279IPR003657WRKY domain
PfamPF031061.2E-22222278IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-33415489IPR003657WRKY domain
SuperFamilySSF1182904.32E-28421489IPR003657WRKY domain
PROSITE profilePS5081134.44424489IPR003657WRKY domain
SMARTSM007744.1E-36429488IPR003657WRKY domain
PfamPF031065.7E-25430486IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MGTPKEETTD EVFSENLEQK PEPDPATKSE LKEKRSFEST SADVVSGELQ KRLSPDADKQ  60
ASKNNEEEST YPPTGQEVSR ISQCDKGINV SQSNQEDISL SRVLENPSEN VGQLQVLKSE  120
AGASGSSQLS SLPKDSDAKS CGSESGVKRL SGKASDSSDQ MQSSNTEILL SQSDQQRVNY  180
PIQKREKALD KLQPRRNPDT SVHGLTSDQG VTLLRVPEKP SEDGYNWRKY GQKLVRGNEY  240
TRSYYKCTYP NCQAKKQVER SHDGHITDIH YIGKHEHPET PSGPQMLPEL VLPLQMKQPE  300
IPIISTLEAE GEKSTRPQET CEPSKPSEAP LVLDIVSACG GVKGTPLKRH KSETEVDKDD  360
GSDSKRQYVE TPSCVCLWCF RSRLYFKLIV VLLSCNRKKD IVATVDTPPI KSQSEPRHIV  420
QTVSEVDIIN DGQRWRKYGQ KIVKGNPNPR SYYRCSVAGC PVKKHVERAS HDPKVVITTY  480
EGQHVHNFPT PRDISQISPV PDVVTTAIRT DSRIESGHKH VVESKSESGE RKHVGDSRTE  540
LGENKHIEKS KPELGGNKHV GDSKSESGES RHIGKSKIES GENKHVGGSR IESGGNKHVE  600
ESKLELGGNK HVGESIPESA ENKHVGLDMA VHIGAN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-30222489877Probable WRKY transcription factor 4
2lex_A1e-30222489877Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF3134520.0AF313452.1 Solanum dulcamara thermal hysteresis protein STHP-64 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016554479.10.0PREDICTED: probable WRKY transcription factor 33 isoform X1
RefseqXP_016554480.10.0PREDICTED: probable WRKY transcription factor 33 isoform X2
RefseqXP_016554482.10.0PREDICTED: probable WRKY transcription factor 33 isoform X2
RefseqXP_016554483.10.0PREDICTED: probable WRKY transcription factor 33 isoform X2
TrEMBLA0A2G2YUD10.0A0A2G2YUD1_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000741580.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45582242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.12e-65WRKY family protein