PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g03740
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family TCP
Protein Properties Length: 157aa    MW: 17892.7 Da    PI: 10.6567
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g03740genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP28.26.2e-09102127126
         TCP   1 aagkkdrhskihTkvggRdRRvRlsa 26 
                 a+g+kdrhsk++T+ g++dRRvRl  
  CA10g03740 102 ATGRKDRHSKVSTASGPKDRRVRLXX 127
                 589********************965 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.3E-7103126IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MNRQLQVSNE KEHKSSSQEE EEKKDESFQE NAQEILQSDY QNQHLQQLPN YFTSSSATLV  60
QKHQSNTQCP SHEEVKKVLL KRKPKRAKQD VMEVHGSRIV RATGRKDRHS KVSTASGPKD  120
RRVRLXXLGS RLTRQFSSTT CKIVLAMTVL VRPSIG*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016443396.11e-37PREDICTED: transcription factor TCP3-like
TrEMBLA0A2G2VS038e-70A0A2G2VS03_CAPBA; Uncharacterized protein
TrEMBLA0A2G2YJC24e-71A0A2G2YJC2_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000684785e-52(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1556966
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53230.13e-09TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3