PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g06890
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 216aa    MW: 24872.6 Da    PI: 6.6595
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g06890genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.11e-243899159
                ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                +dDg+ WrKYGqKe+ + ++pr+YYrCt++   gC+++k+v+r +e+p  + +tY+g+H ++
  CA10g06890 38 VDDGHVWRKYGQKEILNFPHPRNYYRCTHKfdqGCEATKQVQRIQENPPKFRTTYQGHHSCT 99
                59***************************9999**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.2E-262499IPR003657WRKY domain
PROSITE profilePS5081122.3433397IPR003657WRKY domain
SuperFamilySSF1182902.62E-243599IPR003657WRKY domain
SMARTSM007747.4E-3638100IPR003657WRKY domain
PfamPF031063.1E-243998IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MKFNYWWYNY VCVSNQCSPN IVRRKTSATT IKEASTLVDD GHVWRKYGQK EILNFPHPRN  60
YYRCTHKFDQ GCEATKQVQR IQENPPKFRT TYQGHHSCTT YPSISQILFD SSTNEDCSVL  120
LSFNTNKINY HQPYIHSFHS TKQETKGEIS SNCFSPNVGQ SQSDDHLIRA ALSPGSSDHD  180
VNYSSCTTNC SLEMEMKIDM MVDSVDFEDL IPFDF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A8e-223898868OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016545926.11e-143PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A2G2YK671e-143A0A2G2YK67_CAPAN; Uncharacterized protein
STRINGXP_009765461.18e-61(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42302143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.11e-25WRKY DNA-binding protein 70