PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA10g09910

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 161aa MW: 18607.5 Da PI: 10.1016

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA10g09910	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	152.8	1.6e-47	11	137	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+ +yLk+kv g+kl++ +vi ++iy+++PwdLp ++ +e+ewyfF++r +k+ +g r+nr+t++g+Wkatg+dk+++ ++ CA10g09910 11 PGFRFHPTEEELLEFYLKNKVLGRKLRC-DVIGLLNIYSHDPWDLPGLATIGEREWYFFVPRYRKHGSGGRPNRTTQKGFWKATGSDKKIFGLshPRNI 108 9*************************.99***********8777899*********************************976556778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLvfy+grap+g+ktdWvm+e+rl CA10g09910 109 IGLKKTLVFYTGRAPRGSKTDWVMNEFRL 137 *************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	48.656	9	154	IPR003441	NAC domain
SuperFamily	SSF101941	3.4E-53	10	144	IPR003441	NAC domain
Pfam	PF02365	1.9E-26	11	137	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009965	Biological Process	leaf morphogenesis
GO:0010200	Biological Process	response to chitin
GO:0045792	Biological Process	negative regulation of cell size
GO:0048281	Biological Process	inflorescence morphogenesis
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence Send to blast
MEESAMELDL PGFRFHPTEE ELLEFYLKNK VLGRKLRCDV IGLLNIYSHD PWDLPGLATI 60 GEREWYFFVP RYRKHGSGGR PNRTTQKGFW KATGSDKKIF GLSHPRNIIG LKKTLVFYTG 120 RAPRGSKTDW VMNEFRLPDP FSSPQVLYIS VFFLHLNSKI *

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	9e-47	3	137	8	140	Stress-induced transcription factor NAC1
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016544591.1	1e-105	PREDICTED: NAC domain-containing protein 67
Swissprot	Q10S65	2e-72	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A1U8EDX1	1e-104	A0A1U8EDX1_CAPAN; NAC domain-containing protein 2
TrEMBL	A0A2G2YKB6	1e-104	A0A2G2YKB6_CAPAN; NAC domain-containing protein 67
STRING	XP_009605868.1	7e-91	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3531	22	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	2e-78	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]