PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g13700
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 168aa    MW: 19896.8 Da    PI: 10.0671
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g13700genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.42e-21111403128
         NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgkdkevlskkge 98 
                  G+rF+Pt++el+ +yL   + +k+  +  ++++ v++y   ePw+     +++++  yf ++++k++++  r +r++  +g+Wk +gk +ev++ kg+
  CA10g13700  11 TGYRFNPTNKELL-KYLLGFAINKPlPQQYQFMQLVNLYADkEPWEVF-DSTNNDTPRYFITQHNKEKEQHVRVKRTVGiNGTWKLQGKVNEVFDDKGK 107
                 7************.77777777777244456699999997559****6.555678899******************66569****************** PP

         NAM  99 lvglkktLvfy...kgrapkgektdWvmheyrl 128
                 l+g  k L +    k++++++ + +W+m ey+l
  CA10g13700 108 LMGYVKNLKYKphhKKSSNNPPNGEWLMTEYSL 140
                 **********877677888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100526.2229163IPR003441NAC domain
SuperFamilySSF1019411.44E-2210163IPR003441NAC domain
PfamPF023654.8E-1311140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    Send to blast
MASHHQAKDM TGYRFNPTNK ELLKYLLGFA INKPLPQQYQ FMQLVNLYAD KEPWEVFDST  60
NNDTPRYFIT QHNKEKEQHV RVKRTVGING TWKLQGKVNE VFDDKGKLMG YVKNLKYKPH  120
HKKSSNNPPN GEWLMTEYSL YDHYVDPKKI KNRDYVVCKI KKKEERS*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016546502.11e-92PREDICTED: NAC domain-containing protein 53-like
TrEMBLA0A2G2YD551e-114A0A2G2YD55_CAPAN; Uncharacterized protein
STRINGXP_009601217.11e-53(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.13e-14NAC domain containing protein 53