PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g14770
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 465aa    MW: 51673.2 Da    PI: 10.1131
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g14770genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.88.1e-32194250360
                 -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
        WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                 DgynWrKYGqK+vkgse+prsYY+Ct+ +C vkkkvers  d++++ei+Y+geHnh+k
  CA10g14770 194 DGYNWRKYGQKQVKGSEYPRSYYKCTHLKCLVKKKVERSY-DGQITEIVYRGEHNHPK 250
                 9***************************************.***************85 PP
2WRKY919.3e-29383439258
                 --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                 +Dg++WrKYGqK+vkgs +pr YYrC s++C+v k ver+++dp+++++tYeg+Hnh
  CA10g14770 383 EDGFRWRKYGQKVVKGSSYPRRYYRCISPKCNVWKFVERTTDDPRAFITTYEGKHNH 439
                 7******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-28183251IPR003657WRKY domain
SuperFamilySSF1182904.32E-25191251IPR003657WRKY domain
SMARTSM007745.5E-35192250IPR003657WRKY domain
PfamPF031062.8E-24194249IPR003657WRKY domain
PROSITE profilePS5081123.789194251IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.4E-29373442IPR003657WRKY domain
PROSITE profilePS5081130.561377442IPR003657WRKY domain
SuperFamilySSF1182905.75E-26377442IPR003657WRKY domain
SMARTSM007745.0E-31382441IPR003657WRKY domain
PfamPF031061.1E-22383439IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MEVNEAAKLP IARPVASRPR CPLYKSFSEL LTGAVDISST NVHSEMAITT IRPKTIRLKP  60
ATNHALVGEP SSQVGVSEAP VGFGADNILQ SVKKPKVLYK PIAKLAPKKT IPLLENKGSS  120
VSDQQRVIAD AEAHIQSANE VKQQHDPTTE SKQSLSAKSG QDKKKVRSTI VSGSTEEVAQ  180
SLINTSNVDR PSYDGYNWRK YGQKQVKGSE YPRSYYKCTH LKCLVKKKVE RSYDGQITEI  240
VYRGEHNHPK PQPPKRNLSD GHRRTAICND TSKETNNPAW SNQHPQMSEA YVCRRENQND  300
GGLTIHSSKV PCFYDPIVAA GMHTAVRNSE DSAEGSKKLK ATCDEQKSKR RKIKCPSSGA  360
GTSGESTFPY IPNQSTTDSE ITEDGFRWRK YGQKVVKGSS YPRRYYRCIS PKCNVWKFVE  420
RTTDDPRAFI TTYEGKHNHG VPNRRPNSEA SKTSSKSSAM KEKL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-26185442177Probable WRKY transcription factor 4
2lex_A7e-26185442177Probable WRKY transcription factor 4
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016543336.10.0PREDICTED: LOW QUALITY PROTEIN: WRKY transcription factor 44-like
TrEMBLA0A2G2YMG30.0A0A2G2YMG3_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000285300.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99512227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.13e-85WRKY family protein