PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g16380
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 266aa    MW: 30656.1 Da    PI: 10.7268
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g16380genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2538.5e-172370151
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaark 51
                + ykG+r +k++g+Wv+eIr+p     r   r++lg+f t+e+Aa a++ a++
  CA10g16380 23 PVYKGIRKRKSSGKWVSEIREP-----RspNRIWLGTFPTPEMAAVAYDVAAL 70
                68*******************9.....4489*******************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.4E-102370IPR001471AP2/ERF domain
SMARTSM003801.3E-152488IPR001471AP2/ERF domain
PROSITE profilePS5103218.9424261IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-152472IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.6E-212471IPR001471AP2/ERF domain
CDDcd000184.91E-192570No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MSSSGANSTN NSGGASNSTG RHPVYKGIRK RKSSGKWVSE IREPRSPNRI WLGTFPTPEM  60
AAVAYDVAAL XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  180
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  240
XXXXXXXXXX XXXXXXXLNK MEISD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.14e-18ERF family protein